Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015929368.1_cds_XP_016476670.1_68476
CDS Infomation

[gene=LOC107798210] [db_xref=GeneID:107798210] [protein=probable receptor-like serine/threonine-protein kinase At5g57670] [protein_id=XP_016476670.1] [location=join(5625..6024,6374..6453,6720..7488,7566..7814,7900..8063,8138..8217,8315..8462,8559..8708,8813..9055)] [gbkey=CDS]
Sequence

ATGGGGAGTAATCAATTCATCATTTCTCTTTTTCCTAATTTATACATACACACACACAAA
AAAGTGCAGTGTGCGATTCTTTCTCTCAATGCATTTCTAGAGAGAGAAAGAGAGAAAGCG
AAAAACACACCATTACACACTGCACCCTTTTCGCTACAAATCACAATGAAAGTGTGTACT
GGTAACTGTAGTATTGTGGAAAGCGACAGTAATATTATTAATTATAGTGATAAAAATAGT
GGCGCCGGAGAAGATGTGGGCGGCGGTGGAAGGGTGGTGGCAGTGGTGGGAGTGAAGTTA
GATTCGAGGAGTAAAGAGTTGCTGACGTGGGCTTTGGTTAAGGTTGCTCAGCCTGGAGAT
CATGTTGTTGCTGTTCATGTTCTCGATCCAAATACTACTGAAAAACCAGAGCCTATTGCA
TTGGTGAAGACATTTGACTCGATGCTGGCTGCTTATGAAGGCTTCTGCAATTTAAAGCAG
GTGCATTTGAAGCTTAAAGTCTGTCGAGGATCACCAGTTCGTAAAGTTCTTGCTCGTGAA
GCGAAGTTGGAGAGTGCTACAAATTTGATTGTTGGGACTTCAGGCAACCATCATACCATC
CGGTCATCAGTGTCAATTGCAAAGTACTGTGCTAGGAAAGTGGCAAAGAGCATCTCAGTT
ATTGCTGTTGACAATGGCAAGATCGTCTATCAAAGGGACTCAGGTGCTTCATCAGTTGGA
GATGAGTCTAGTGACTCAGATGTGCCCGAATCAAGATTCAAGAGAAGGAAGACATTGAGA
AAAAGTCCTTTGAGCTTAACACCTAAAAAAGCTGCGGAAAAAAACTCGTGTCCTGAGAAC
AATGCTATGGCTTTAGTGCCTGTTAGGAGTGTTGAAGTCCATCAATCAAAGTCTCGGTGG
GCACTGCTTCGACGAGTGTTTCTTCACAACGTAGTGGCATCTGAAAAATCTCCTACGAAA
AGGTCATCTATGATGCAATGGGTTTGGAAACGACCAAGTCGGCAATCTTTTGCAGCTATC
TACCCTGATCATAAACAGAGTGTATCTGACAAGGATGAGCCTCATCGTACAAAGTTGGAT
GAAGAGAAGGGAGCAATTATTCCTTTTGGAAGTGATGCTAGTGCTCTTTCAGATGAGCGC
TTTATTATCCTTCCTGAGGAACTGGAGGGTCTTACTGAGAGGTACTCGTCTATTTGCAGA
TTGTTCAGCTACCAGGAGCTTTGTTCAGCAACTTCTAGTTTCCTGCCTGAGAATTTGATT
GGAAAGGGAGGCAGCAGTAAGGTTTACAAAGGGTGCCTTCCAGACGGCAAGCAGCTGGCT
GTAAAAATATTGAAGCCTTCAAAAGTTGTGGCAAAGCAATTTCGTTCAGAGATTGAAATA
ATTACGACTCTGCACCACATACACATTATTTCACTGTTTGGGTTTTGTTTAGAGGAGAAC
AACCTTCTGTTGGTTTATGATCTGTTATCCAGAGGAAGCTTAGAAGAGAATCTCCACGGT
TCTGAAAGGGATCAAAATTCACTTAGCTGGGAAGATAGGTACAAGGTTGCTTTGGGTGTT
GCTGAGGCACTGGACCACCTACACAATGCAGCTGATGGCCCCATAATTCATAGGGATGTG
AAATCTTCAAACATTCTCCTGTCTGATGATTTTGTGCCACAGCTTTCAGATTTTGGACTT
GCAACATTGGCCTCAAGTTGTTCATATCATTTGGATAGTGCTGATGTTGCTGGAACATTT
GGCTACTTGGCTCCAGAGTACTTTATGCAAGGAAAGATAACTGAAAAGATTGATGTCTAT
GCATTTGGTGTTGTTCTCCTTGAGCTTTTGACTGGTAAAAAGCCAATTGATAACGGAAAT
GGGAAAGGTCAGGAAAGCTTAGTCATGTGGGCGAAACAAGTTCTGAAGGGTGGGAAAATG
AGGGAGTTGCTAGATCCTAGCATGATAGACGCTTATGACCATGATCAATTTGAGAGAATG
GTCCTAGCTGCATCACTTTGCATCAGACGAGCTCCTGGATTTAGACCTCAAATTGACATC
GTGGTGAAACTCCTCCAAGGTGACACGGAAACAATTAAGTGGGCGAGAGAAGAAGGCAAA
GCTTCAGAGGAAGTAGATGCTGTTGATGGTGAACAACCAGCGTCAAACATACAATCCTTT
ATTAATCTTGCATTGATGAATTTGGAGGATGAGTCCCCACTTTCCTGTAACAGCACAGGA
CCAACCATTTCCGTGGAGGATTATTTGCTAGGGAGGTTTAGTCGCTCTTCAAGTTTCGAC
TAG

Peptide Sequence

PEP ID

XP_016476670.1
PEP Infomation

PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 [Nicotiana tabacum]
Sequence

MGSNQFIISLFPNLYIHTHKKVQCAILSLNAFLEREREKAKNTPLHTAPFSLQITMKVCT
GNCSIVESDSNIINYSDKNSGAGEDVGGGGRVVAVVGVKLDSRSKELLTWALVKVAQPGD
HVVAVHVLDPNTTEKPEPIALVKTFDSMLAAYEGFCNLKQVHLKLKVCRGSPVRKVLARE
AKLESATNLIVGTSGNHHTIRSSVSIAKYCARKVAKSISVIAVDNGKIVYQRDSGASSVG
DESSDSDVPESRFKRRKTLRKSPLSLTPKKAAEKNSCPENNAMALVPVRSVEVHQSKSRW
ALLRRVFLHNVVASEKSPTKRSSMMQWVWKRPSRQSFAAIYPDHKQSVSDKDEPHRTKLD
EEKGAIIPFGSDASALSDERFIILPEELEGLTERYSSICRLFSYQELCSATSSFLPENLI
GKGGSSKVYKGCLPDGKQLAVKILKPSKVVAKQFRSEIEIITTLHHIHIISLFGFCLEEN
NLLLVYDLLSRGSLEENLHGSERDQNSLSWEDRYKVALGVAEALDHLHNAADGPIIHRDV
KSSNILLSDDFVPQLSDFGLATLASSCSYHLDSADVAGTFGYLAPEYFMQGKITEKIDVY
AFGVVLLELLTGKKPIDNGNGKGQESLVMWAKQVLKGGKMRELLDPSMIDAYDHDQFERM
VLAASLCIRRAPGFRPQIDIVVKLLQGDTETIKWAREEGKASEEVDAVDGEQPASNIQSF
INLALMNLEDESPLSCNSTGPTISVEDYLLGRFSRSSSFD

Transcript Sequence

Gene sequence data has not been registered.